fdasrsf
2.5.0
User Guide
Functional Alignment
Functional Principal Component Analysis
Elastic Functional Boxplots
Functional Principal Least Squares
Elastic Regression
Elastic Principal Component Regression
Elastic Functional Changepoint
Elastic GLM Regression
Elastic Functional Tolerance Bounds
Elastic Functional Clustering
Elastic Image Warping
Curve Registration
SRVF Geodesic Computation
Utility Functions
Curve Functions
UMAP EFDA Metrics
fdasrsf
Index
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Index
A
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B
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C
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D
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E
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F
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G
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I
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J
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K
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L
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M
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N
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O
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P
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Q
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R
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S
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T
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U
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W
|
Z
A
align_fPCA() (in module time_warping)
align_fPLS() (in module time_warping)
ampbox (class in boxplots)
B
back_parallel_transport() (in module geodesic)
Basis_Normal_A() (in module curve_functions)
bootTB() (in module tolerance)
boxplots
module
C
calc_alphadot() (in module geodesic)
calc_fpca() (fPCA.fdahpca method)
(fPCA.fdajpca method)
(fPCA.fdavpca method)
calc_j() (in module curve_functions)
calc_model() (elastic_glm_regression.elastic_glm_regression method)
(pcr_regression.elastic_lpcr_regression method)
(pcr_regression.elastic_mlpcr_regression method)
(pcr_regression.elastic_pcr_regression method)
(regression.elastic_logistic method)
(regression.elastic_mlogistic method)
(regression.elastic_regression method)
calculate_energy() (in module geodesic)
calculate_gradE() (in module geodesic)
calculate_variance() (in module curve_functions)
calculatecentroid() (in module curve_functions)
compute() (elastic_changepoint.elastic_amp_change_ff method)
(elastic_changepoint.elastic_change method)
(elastic_changepoint.elastic_ph_change_ff method)
construct_boxplot() (boxplots.ampbox method)
(boxplots.phbox method)
cov_integral() (in module geodesic)
cumtrapzmid() (in module utility_functions)
curve_functions
module
curve_stats
module
curve_to_q() (in module curve_functions)
curve_zero_crossing() (in module curve_functions)
D
diffop() (in module utility_functions)
E
efda_distance() (in module umap_metric)
efda_distance_curve() (in module umap_metric)
elastic_amp_change_ff (class in elastic_changepoint)
elastic_change (class in elastic_changepoint)
elastic_changepoint
module
elastic_depth() (in module utility_functions)
elastic_distance() (in module utility_functions)
elastic_distance_curve() (in module curve_functions)
elastic_glm_regression
module
elastic_glm_regression (class in elastic_glm_regression)
elastic_logistic (class in regression)
elastic_lpcr_regression (class in pcr_regression)
elastic_mlogistic (class in regression)
elastic_mlpcr_regression (class in pcr_regression)
elastic_pcr_regression (class in pcr_regression)
elastic_ph_change_ff (class in elastic_changepoint)
elastic_regression (class in regression)
elastic_shooting() (in module curve_functions)
elastic_shooting_vector() (in module curve_functions)
F
f_K_fold() (in module utility_functions)
f_to_srsf() (in module utility_functions)
fdacurve (class in curve_stats)
fdahpca (class in fPCA)
fdajpca (class in fPCA)
fdavpca (class in fPCA)
fdawarp (class in time_warping)
find_basis_normal() (in module curve_functions)
find_basis_normal_path() (in module geodesic)
find_best_rotation() (in module curve_functions)
find_rotation_and_seed_coord() (in module curve_functions)
find_rotation_and_seed_q() (in module curve_functions)
find_rotation_and_seed_unique() (in module curve_functions)
fPCA
module
fPLS
module
G
gauss_model() (time_warping.fdawarp method)
geigen() (in module utility_functions)
geod_dist_path_strt() (in module geodesic)
geod_sphere() (in module geodesic)
geodesic
module
gradient_spline() (in module utility_functions)
gram_schmidt() (in module curve_functions)
group_action_by_gamma() (in module curve_functions)
group_action_by_gamma_coord() (in module curve_functions)
I
image
module
init_path_geod() (in module geodesic)
init_path_rand() (in module geodesic)
innerprod_q() (in module utility_functions)
innerprod_q2() (in module curve_functions)
inverse_exp() (in module curve_functions)
inverse_exp_coord() (in module curve_functions)
invertGamma() (in module utility_functions)
J
joint_gauss_model() (time_warping.fdawarp method)
K
karcher_cov() (curve_stats.fdacurve method)
karcher_mean() (curve_stats.fdacurve method)
kmeans
module
kmeans_align() (in module kmeans)
L
logistic_warp() (in module regression)
logit_gradient() (in module regression)
logit_hessian() (in module regression)
logit_loss() (in module regression)
M
mlogit_gradient() (in module regression)
mlogit_loss() (in module regression)
mlogit_warp_grad() (in module regression)
module
boxplots
curve_functions
curve_stats
elastic_changepoint
elastic_glm_regression
fPCA
fPLS
geodesic
image
kmeans
pcr_regression
regression
time_warping
tolerance
umap_metric
utility_functions
multiple_align_functions() (time_warping.fdawarp method)
mvtol_region() (in module tolerance)
N
normal() (in module time_warping)
O
optimum_reparam() (in module utility_functions)
optimum_reparam_curve() (in module curve_functions)
optimum_reparam_pair() (in module utility_functions)
outlier_detection() (in module utility_functions)
P
pairwise_align_bayes() (in module time_warping)
pairwise_align_bayes_infHMC() (in module time_warping)
pairwise_align_functions() (in module time_warping)
parallel_translate() (in module curve_functions)
path_straightening() (in module geodesic)
pcaTB() (in module tolerance)
pcr_regression
module
phbox (class in boxplots)
phi() (in module regression)
plot() (boxplots.ampbox method)
(boxplots.phbox method)
(curve_stats.fdacurve method)
(elastic_changepoint.elastic_amp_change_ff method)
(elastic_changepoint.elastic_change method)
(elastic_changepoint.elastic_ph_change_ff method)
(fPCA.fdahpca method)
(fPCA.fdajpca method)
(fPCA.fdavpca method)
(time_warping.fdawarp method)
plot_geod() (in module geodesic)
pls_svd() (in module fPLS)
pre_proc_curve() (in module curve_functions)
predict() (elastic_glm_regression.elastic_glm_regression method)
(pcr_regression.elastic_lpcr_regression method)
(pcr_regression.elastic_mlpcr_regression method)
(pcr_regression.elastic_pcr_regression method)
(regression.elastic_logistic method)
(regression.elastic_mlogistic method)
(regression.elastic_regression method)
project_curve() (in module curve_functions)
project_tangent() (in module curve_functions)
psi() (in module curve_functions)
Q
q_to_curve() (in module curve_functions)
R
rand() (in module elastic_glm_regression)
(in module time_warping)
randn() (in module curve_stats)
randomGamma() (in module utility_functions)
regression
module
regression_warp() (in module regression)
reparam_image() (in module image)
resamplecurve() (in module curve_functions)
resamplefunction() (in module utility_functions)
rgam() (in module utility_functions)
rwishart() (in module tolerance)
S
sample_shapes() (curve_stats.fdacurve method)
scale_curve() (in module curve_functions)
shape_pca() (curve_stats.fdacurve method)
shift_f() (in module curve_functions)
smooth_data() (in module utility_functions)
SqrtMean() (in module utility_functions)
SqrtMeanInverse() (in module utility_functions)
SqrtMedian() (in module utility_functions)
srsf_align() (time_warping.fdawarp method)
srsf_to_f() (in module utility_functions)
srvf_align() (curve_stats.fdacurve method)
T
time_warping
module
tolerance
module
U
umap_metric
module
update_path() (in module geodesic)
update_progress() (in module utility_functions)
utility_functions
module
W
warp_f_gamma() (in module utility_functions)
warp_q_gamma() (in module utility_functions)
Z
zero_crossing() (in module utility_functions)
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