Index A | B | C | D | E | F | G | I | J | K | L | M | N | O | P | Q | R | S | T | U | W | Z A align_fPCA() (in module time_warping) align_fPLS() (in module time_warping) ampbox (class in boxplots) B back_parallel_transport() (in module geodesic) Basis_Normal_A() (in module curve_functions) bootTB() (in module tolerance) boxplots module C calc_alphadot() (in module geodesic) calc_fpca() (fPCA.fdahpca method) (fPCA.fdajpca method) (fPCA.fdavpca method) calc_j() (in module curve_functions) calc_model() (elastic_glm_regression.elastic_glm_regression method) (pcr_regression.elastic_lpcr_regression method) (pcr_regression.elastic_mlpcr_regression method) (pcr_regression.elastic_pcr_regression method) (regression.elastic_logistic method) (regression.elastic_mlogistic method) (regression.elastic_regression method) calculate_energy() (in module geodesic) calculate_gradE() (in module geodesic) calculate_variance() (in module curve_functions) calculatecentroid() (in module curve_functions) compute() (elastic_changepoint.elastic_amp_change_ff method) (elastic_changepoint.elastic_change method) (elastic_changepoint.elastic_ph_change_ff method) construct_boxplot() (boxplots.ampbox method) (boxplots.phbox method) cov_integral() (in module geodesic) cumtrapzmid() (in module utility_functions) curve_functions module curve_stats module curve_to_q() (in module curve_functions) curve_zero_crossing() (in module curve_functions) D diffop() (in module utility_functions) E efda_distance() (in module umap_metric) efda_distance_curve() (in module umap_metric) elastic_amp_change_ff (class in elastic_changepoint) elastic_change (class in elastic_changepoint) elastic_changepoint module elastic_depth() (in module utility_functions) elastic_distance() (in module utility_functions) elastic_distance_curve() (in module curve_functions) elastic_glm_regression module elastic_glm_regression (class in elastic_glm_regression) elastic_logistic (class in regression) elastic_lpcr_regression (class in pcr_regression) elastic_mlogistic (class in regression) elastic_mlpcr_regression (class in pcr_regression) elastic_pcr_regression (class in pcr_regression) elastic_ph_change_ff (class in elastic_changepoint) elastic_regression (class in regression) elastic_shooting() (in module curve_functions) elastic_shooting_vector() (in module curve_functions) F f_K_fold() (in module utility_functions) f_to_srsf() (in module utility_functions) fdacurve (class in curve_stats) fdahpca (class in fPCA) fdajpca (class in fPCA) fdavpca (class in fPCA) fdawarp (class in time_warping) find_basis_normal() (in module curve_functions) find_basis_normal_path() (in module geodesic) find_best_rotation() (in module curve_functions) find_rotation_and_seed_coord() (in module curve_functions) find_rotation_and_seed_q() (in module curve_functions) find_rotation_and_seed_unique() (in module curve_functions) fPCA module fPLS module G gauss_model() (time_warping.fdawarp method) geigen() (in module utility_functions) geod_dist_path_strt() (in module geodesic) geod_sphere() (in module geodesic) geodesic module gradient_spline() (in module utility_functions) gram_schmidt() (in module curve_functions) group_action_by_gamma() (in module curve_functions) group_action_by_gamma_coord() (in module curve_functions) I image module init_path_geod() (in module geodesic) init_path_rand() (in module geodesic) innerprod_q() (in module utility_functions) innerprod_q2() (in module curve_functions) inverse_exp() (in module curve_functions) inverse_exp_coord() (in module curve_functions) invertGamma() (in module utility_functions) J joint_gauss_model() (time_warping.fdawarp method) K karcher_cov() (curve_stats.fdacurve method) karcher_mean() (curve_stats.fdacurve method) kmeans module kmeans_align() (in module kmeans) L logistic_warp() (in module regression) logit_gradient() (in module regression) logit_hessian() (in module regression) logit_loss() (in module regression) M mlogit_gradient() (in module regression) mlogit_loss() (in module regression) mlogit_warp_grad() (in module regression) module boxplots curve_functions curve_stats elastic_changepoint elastic_glm_regression fPCA fPLS geodesic image kmeans pcr_regression regression time_warping tolerance umap_metric utility_functions multiple_align_functions() (time_warping.fdawarp method) mvtol_region() (in module tolerance) N normal() (in module time_warping) O optimum_reparam() (in module utility_functions) optimum_reparam_curve() (in module curve_functions) optimum_reparam_pair() (in module utility_functions) outlier_detection() (in module utility_functions) P pairwise_align_bayes() (in module time_warping) pairwise_align_bayes_infHMC() (in module time_warping) pairwise_align_functions() (in module time_warping) parallel_translate() (in module curve_functions) path_straightening() (in module geodesic) pcaTB() (in module tolerance) pcr_regression module phbox (class in boxplots) phi() (in module regression) plot() (boxplots.ampbox method) (boxplots.phbox method) (curve_stats.fdacurve method) (elastic_changepoint.elastic_amp_change_ff method) (elastic_changepoint.elastic_change method) (elastic_changepoint.elastic_ph_change_ff method) (fPCA.fdahpca method) (fPCA.fdajpca method) (fPCA.fdavpca method) (time_warping.fdawarp method) plot_geod() (in module geodesic) pls_svd() (in module fPLS) pre_proc_curve() (in module curve_functions) predict() (elastic_glm_regression.elastic_glm_regression method) (pcr_regression.elastic_lpcr_regression method) (pcr_regression.elastic_mlpcr_regression method) (pcr_regression.elastic_pcr_regression method) (regression.elastic_logistic method) (regression.elastic_mlogistic method) (regression.elastic_regression method) project() (fPCA.fdahpca method) (fPCA.fdajpca method) (fPCA.fdavpca method) project_curve() (in module curve_functions) project_tangent() (in module curve_functions) psi() (in module curve_functions) Q q_to_curve() (in module curve_functions) R rand() (in module elastic_glm_regression) (in module time_warping) randn() (in module curve_stats) randomGamma() (in module utility_functions) regression module regression_warp() (in module regression) reparam_image() (in module image) resamplecurve() (in module curve_functions) resamplefunction() (in module utility_functions) rgam() (in module utility_functions) rwishart() (in module tolerance) S sample_shapes() (curve_stats.fdacurve method) scale_curve() (in module curve_functions) shape_pca() (curve_stats.fdacurve method) shift_f() (in module curve_functions) smooth_data() (in module utility_functions) SqrtMean() (in module utility_functions) SqrtMeanInverse() (in module utility_functions) SqrtMedian() (in module utility_functions) srsf_align() (time_warping.fdawarp method) srsf_to_f() (in module utility_functions) srvf_align() (curve_stats.fdacurve method) T time_warping module tolerance module U umap_metric module update_path() (in module geodesic) update_progress() (in module utility_functions) utility_functions module W warp_f_gamma() (in module utility_functions) warp_q_gamma() (in module utility_functions) Z zero_crossing() (in module utility_functions)